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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs11905334 chr20:30425043 A/G 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs11905404 chr20:30235979 T/C 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs11907253 chr20:30232673 G/A 6.36E-5 67 27.92 8.25 7.6 KM Plot
UVM rs11907631 chr20:30358496 T/C 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs11907651 chr20:30414334 G/A 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs12148185 chr15:40946293 T/A 1.26E-5 67 27.87 24.87 17.07 KM Plot
UVM rs12298132 chr12:132602374 A/G 3.82E-7 66 31.83 23.63 0.73 KM Plot
UVM rs12298478 chr12:132603010 A/G 3.82E-7 66 31.83 23.63 0.73 KM Plot
UVM rs12302107 chr12:132604743 A/G 3.82E-7 66 31.83 23.63 0.73 KM Plot
UVM rs12302637 chr12:132569028 T/C 3.4E-7 67 31.83 23.25 0.73 KM Plot
UVM rs12303484 chr12:132609558 G/A 4.29E-7 67 27.92 24.87 0.73 KM Plot
UVM rs12303540 chr12:132609679 A/G 4.29E-7 67 0.73 24.87 27.92 KM Plot
UVM rs12303787 chr12:132604906 T/C 3.82E-7 66 31.83 23.63 0.73 KM Plot
UVM rs12310789 chr12:9806067 G/A 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs12316973 chr12:132602272 G/A 3.82E-7 66 31.83 23.63 0.73 KM Plot